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Hierarchical Taxonomy Clustering

OrganizationPopular
benchflow-ai
hierarchical-taxonomy-clustering

Build unified multi-level category taxonomy from hierarchical product category paths from any e-commerce companies using embedding-based recursive clustering with intelligent category naming via weighted word frequency analysis.

Overview

Publisherbenchflow-ai
Repositoryskillsbench
Skill namehierarchical-taxonomy-clustering
Stars
1.8K
Forks
367
Bundled files
5
LicenseApache-2.0
Links
  • Markdown instructions

    A SKILL.md file the model loads on demand, so it only costs tokens when a request actually matches.

  • Works with any LLM

    AI skills are plain Markdown, not provider-specific code, so this works with GPT, Claude, Gemini, Grok, or a local model.

  • 5 bundled files

    Scripts, templates, and references the model can read while it works. Files are read-only and never executed.

  • Open source

    Published by benchflow-ai on GitHub. Read the source before you install it.

Installation

Install the Hierarchical Taxonomy Clustering AI skill in TypingMind to use it with any LLM, or drop it into another agent that reads SKILL.md.

1

Install in TypingMind

TypingMind installs a skill straight from its GitHub folder — it reads SKILL.md, bundles the resource files, and stores the result locally.

  1. Open the app and go to Plugins → Skills.
  2. Choose "Install from GitHub".
  3. Paste the skill folder URL below and confirm.
  4. Enable the skill in any chat where you want it available.
Plugins → Skills → Add skill → From GitHub URL, then paste the folder URL and press Continue.
2

Install in another agent

Any agent that reads the Agent Skills format can use this skill — copy the folder into that agent's skills directory.

Claude Code — .claude/skills
git clone --depth 1 https://github.com/benchflow-ai/skillsbench.git /tmp/skillsbench
mkdir -p .claude/skills
cp -r /tmp/skillsbench/tasks-extra/taxonomy-tree-merge/environment/skills/hierarchical-taxonomy-clustering .claude/skills/hierarchical-taxonomy-clustering
Restart Claude Code after copying so it picks up the new skill.

Use it in TypingMind

Enable Hierarchical Taxonomy Clustering in any TypingMind chat and the model takes it from there. Its name and description sit in the system prompt, and the moment a request matches, the model loads the full instructions itself — you never invoke it by hand, and it costs no tokens until it is actually used.

The model loads Hierarchical Taxonomy Clustering on its own as soon as a request matches it.

Works with any AI model

AI skills are plain Markdown instructions rather than provider-specific code, so Hierarchical Taxonomy Clustering is not tied to the model it was written for. Install it once in TypingMind and use it with GPT-5, Claude, Gemini, Grok, DeepSeek, Mistral, Llama, or a local model you run yourself — all on your own API keys.

  • Loaded only when it is needed

    The system prompt carries just the name and description. The instructions are fetched on the first matching request, so an idle skill costs nothing.

  • Switch models mid-chat

    Because the skill is instructions rather than code, changing model does not break it — the next model reads the same SKILL.md.

Skill instructions

This is the SKILL.md content the model loads. Read it before installing — a skill is instructions your model will follow.

Hierarchical Taxonomy Clustering

Create a unified multi-level taxonomy from hierarchical category paths by clustering similar paths and automatically generating meaningful category names.

Problem

Given category paths from multiple sources (e.g., "electronics -> computers -> laptops"), create a unified taxonomy that groups similar paths across sources, generates meaningful category names, and produces a clean N-level hierarchy (typically 5 levels). The unified category taxonomy could be used to do analysis or metric tracking on products from different platform.

Methodology

  1. Hierarchical Weighting: Convert paths to embeddings with exponentially decaying weights (Level i gets weight 0.6^(i-1)) to signify the importance of category granularity
  2. Recursive Clustering: Hierarchically cluster at each level (10-20 clusters at L1, 3-20 at L2-L5) using cosine distance
  3. Intelligent Naming: Generate category names via weighted word frequency + lemmatization + bundle word logic
  4. Quality Control: Exclude all ancestor words (parent, grandparent, etc.), avoid ancestor path duplicates, clean special characters

Output

DataFrame with added columns:

  • unified_level_1: Top-level category (e.g., "electronic | device")
  • unified_level_2: Second-level category (e.g., "computer | laptop")
  • unified_level_3 through unified_level_N: Deeper levels

Category names use | separator, max 5 words, covering 70%+ of records in each cluster.

Installation

bash
pip install pandas numpy scipy sentence-transformers nltk tqdm
python -c "import nltk; nltk.download('wordnet'); nltk.download('omw-1.4')"

4-Step Pipeline

Step 1: Load, Standardize, Filter and Merge (step1_preprocessing_and_merge.py)

  • Input: List of (DataFrame, source_name) tuples, each of the with category_path column
  • Process: Per-source deduplication, text cleaning (remove &/,/'/-/quotes,'and' or "&", "," and so on, lemmatize words as nouns), normalize delimiter to >, depth filtering, prefix removal, then merge all sources. source_level should reflect the processed version of the source level name
  • Output: Merged DataFrame with category_path, source, depth, source_level_1 through source_level_N

Step 2: Weighted Embeddings (step2_weighted_embedding_generation.py)

  • Input: DataFrame from Step 1
  • Output: Numpy embedding matrix (n_records × 384)
  • Weights: L1=1.0, L2=0.6, L3=0.36, L4=0.216, L5=0.1296 (exponential decay 0.6^(n-1))
  • Performance: For ~10,000 records, expect 2-5 minutes. Progress bar will show encoding status.

Step 3: Recursive Clustering (step3_recursive_clustering_naming.py)

  • Input: DataFrame + embeddings from Step 2
  • Output: Assignments dict {index → {level_1: ..., level_5: ...}}
  • Average linkage + cosine distance, 10-20 clusters at L1, 3-20 at L2-L5
  • Word-based naming: weighted frequency + lemmatization + coverage ≥70%
  • Performance: For ~10,000 records, expect 1-3 minutes for hierarchical clustering and naming. Be patient - the system is working through recursive levels.

Step 4: Export Results (step4_result_assignments.py)

  • Input: DataFrame + assignments from Step 3
  • Output:
    • unified_taxonomy_full.csv - all records with unified categories
    • unified_taxonomy_hierarchy.csv - unique taxonomy structure

Usage

Use scripts/pipeline.py to run the complete 4-step workflow.

See scripts/pipeline.py for:

  • Complete implementation of all 4 steps
  • Example code for processing multiple sources
  • Command-line interface
  • Individual step usage (for advanced control)

Bundled files

The model reads these on demand while the skill is loaded. They are exposed as readable files and are never executed.

Frequently asked questions

What does the Hierarchical Taxonomy Clustering AI skill do?

Build unified multi-level category taxonomy from hierarchical product category paths from any e-commerce companies using embedding-based recursive clustering with intelligent category naming via weighted word frequency analysis.

Why use Hierarchical Taxonomy Clustering on TypingMind?

Because you install it once and use it with any model. Hierarchical Taxonomy Clustering is plain Markdown rather than provider-specific code, so the same skill runs on GPT-5, Claude, Gemini, Grok, or a local model — and you can switch model mid-chat without it breaking. TypingMind runs on your own API keys, so you pay providers directly instead of a per-seat subscription, and your skills and chats stay in your own storage.

How do I install Hierarchical Taxonomy Clustering in TypingMind?

Open Plugins → Skills → Install from GitHub in TypingMind and paste https://github.com/benchflow-ai/skillsbench/tree/main/tasks-extra/taxonomy-tree-merge/environment/skills/hierarchical-taxonomy-clustering. TypingMind reads its SKILL.md and bundles its files and installs it as a skill you can enable per chat.

Which AI models can use Hierarchical Taxonomy Clustering?

Any model you connect in TypingMind. AI skills are plain Markdown instructions rather than provider-specific code, so GPT, Claude, Gemini, Grok, and local models can all load this skill when a request matches it.

How many AI models can I use with Hierarchical Taxonomy Clustering?

As many as you like. As long as a model supports skills, you can use Hierarchical Taxonomy Clustering with it — GPT, Claude, Gemini, Grok, DeepSeek, Mistral, Llama and more — all on TypingMind with your own API keys.

Is the Hierarchical Taxonomy Clustering AI skill free?

Yes. It is published on GitHub by benchflow-ai under the Apache-2.0 license. You only pay your own AI provider for the tokens you use.

What are AI skills?

An AI skill is a reusable instruction bundle that teaches an AI model how to do one specific task. It follows the open Agent Skills format: a SKILL.md file with a name and description, plus any scripts, templates or reference files the model may need. The model reads the instructions only when your request matches the skill, so an installed skill costs nothing until it is used.

How are AI skills different from plugins or MCP servers?

A plugin or MCP server gives a model new tools to call — code that runs somewhere and returns a result. An AI skill gives the model knowledge and process instead: how to approach a task, which steps to follow, what good output looks like. Skills are plain Markdown, so they need no server, no API key and no runtime, and they work with any model.

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