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Cognitive Paradigm Design

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NeuroAIHub
cognitive-paradigm-design

Expert guidance for selecting and parameterizing cognitive psychology experimental paradigms based on research questions

Overview

PublisherNeuroAIHub
RepositoryBrainPilot
Skill namecognitive-paradigm-design
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1.1K
Forks
74
Bundled files
2
LicenseAGPL-3.0
Links
  • Markdown instructions

    A SKILL.md file the model loads on demand, so it only costs tokens when a request actually matches.

  • Works with any LLM

    AI skills are plain Markdown, not provider-specific code, so this works with GPT, Claude, Gemini, Grok, or a local model.

  • 2 bundled files

    Scripts, templates, and references the model can read while it works. Files are read-only and never executed.

  • Open source

    Published by NeuroAIHub on GitHub. Read the source before you install it.

Installation

Install the Cognitive Paradigm Design AI skill in TypingMind to use it with any LLM, or drop it into another agent that reads SKILL.md.

1

Install in TypingMind

TypingMind installs a skill straight from its GitHub folder — it reads SKILL.md, bundles the resource files, and stores the result locally.

  1. Open the app and go to Plugins → Skills.
  2. Choose "Install from GitHub".
  3. Paste the skill folder URL below and confirm.
    https://github.com/NeuroAIHub/BrainPilot/tree/main/packages/skills/skills/03_Cognitive_Psychology/cognitive-paradigm-design
  4. Enable the skill in any chat where you want it available.
Plugins → Skills → Add skill → From GitHub URL, then paste the folder URL and press Continue.
2

Install in another agent

Any agent that reads the Agent Skills format can use this skill — copy the folder into that agent's skills directory.

Claude Code — .claude/skills
git clone --depth 1 https://github.com/NeuroAIHub/BrainPilot.git /tmp/BrainPilot
mkdir -p .claude/skills
cp -r /tmp/BrainPilot/packages/skills/skills/03_Cognitive_Psychology/cognitive-paradigm-design .claude/skills/cognitive-paradigm-design
Restart Claude Code after copying so it picks up the new skill.

Use it in TypingMind

Enable Cognitive Paradigm Design in any TypingMind chat and the model takes it from there. Its name and description sit in the system prompt, and the moment a request matches, the model loads the full instructions itself — you never invoke it by hand, and it costs no tokens until it is actually used.

The model loads Cognitive Paradigm Design on its own as soon as a request matches it.

Works with any AI model

AI skills are plain Markdown instructions rather than provider-specific code, so Cognitive Paradigm Design is not tied to the model it was written for. Install it once in TypingMind and use it with GPT-5, Claude, Gemini, Grok, DeepSeek, Mistral, Llama, or a local model you run yourself — all on your own API keys.

  • Loaded only when it is needed

    The system prompt carries just the name and description. The instructions are fetched on the first matching request, so an idle skill costs nothing.

  • Switch models mid-chat

    Because the skill is instructions rather than code, changing model does not break it — the next model reads the same SKILL.md.

Skill instructions

This is the SKILL.md content the model loads. Read it before installing — a skill is instructions your model will follow.

Cognitive Paradigm Design Skill

This skill helps researchers select appropriate experimental paradigms for cognitive psychology research questions, configure their parameters with cited defaults, and design proper controls. It encodes methodological knowledge from the cognitive experimental literature that a non-specialist would not know.

For detailed paradigm parameters, see references/classic-paradigms.md. For design methodology, see references/design-principles.md.


Research Planning Protocol

Before executing the domain-specific steps below, you MUST:

  1. State the research question — What specific cognitive process or phenomenon is being investigated?
  2. Justify the method choice — Why an experimental paradigm (not survey, corpus, modeling)? What alternatives were considered?
  3. Declare expected outcomes — What pattern of results would support vs. refute the hypothesis?
  4. Note assumptions and limitations — What does this paradigm assume? Where could it mislead?
  5. Present the plan to the user and WAIT for confirmation before proceeding.

For detailed methodology guidance, see the research-literacy skill.

⚠️ Verification Notice

This skill was generated by AI from academic literature. All parameters, thresholds, and citations require independent verification before use in research. If you find errors, please open an issue.

Core Workflow

When given a research question, follow this sequence:

Step 1: Identify the Cognitive Construct

Map the research question to one or more core cognitive domains:

DomainCore ConstructsExample Research Questions
AttentionSelective attention, spatial orienting, temporal attention, attentional capture"Does emotion capture attention automatically?"
MemoryEncoding, retrieval, WM capacity, false memory, recognition vs. recall"Do older adults show increased false memory?"
Decision MakingRisk, reward learning, impulsivity, perceptual decisions"Are substance users more impulsive in intertemporal choice?"
PerceptionThresholds, masking, awareness, object recognition"What is the contrast threshold for face detection?"
LanguageLexical access, sentence parsing, semantic processing"Does syntactic complexity slow reading at the verb?"
Executive FunctionInhibition, task switching, updating, cognitive flexibility"Is SSRT longer in ADHD children?"

Step 2: Select a Paradigm

Use this decision tree to narrow paradigm choices:

Attention:

  • Conflict/interference between dimensions -> Stroop task or Flanker task
  • If response-level conflict is key -> Flanker (separates search from conflict)
  • If word-reading automaticity is key -> Stroop
  • Spatial orienting -> Posner cueing
  • Exogenous (reflexive) vs. endogenous (voluntary) -> vary cue type and SOA
  • Search efficiency / feature binding -> Visual search
  • Temporal limits of attention -> Attentional blink

Memory:

  • STM scanning speed -> Sternberg task
  • False memory production -> DRM paradigm
  • Recollection vs. familiarity -> Remember-Know
  • VWM capacity -> Change detection
  • Serial position effects -> Serial position curve

Decision Making:

  • Decision making under ambiguity with learning -> Iowa Gambling Task
  • Impulsivity / temporal discounting -> Delay discounting
  • Sensitivity vs. bias decomposition -> Signal Detection Theory (Yes/No or 2AFC)
  • Perceptual/cognitive discrimination -> 2AFC

Perception:

  • Threshold estimation -> Psychophysical staircase (1-up/2-down or QUEST)
  • Few trials available -> QUEST (converges in ~30-50 trials; Watson & Pelli, 1983)
  • Simple implementation needed -> 1-up/2-down (converges in ~50-80 trials; Levitt, 1971)
  • Subliminal processing / visibility control -> Masking paradigms
  • Vary visibility continuously -> backward masking (SOA manipulation)
  • Prevent conscious identification -> sandwich masking (forward + backward)

Language:

  • Single-word recognition / lexical access -> Lexical decision
  • Spreading activation / semantic networks -> Priming (with lexical decision or naming)
  • Incremental sentence comprehension -> Self-paced reading or eye-tracking
  • Budget-friendly, no specialized equipment -> Self-paced reading
  • Maximum ecological validity and rich temporal data -> Eye-tracking

Executive Function:

  • Simple response inhibition (withholding) -> Go/No-Go
  • Action cancellation (stopping initiated response) -> Stop-signal task
  • Need a latent measure of inhibition speed -> Stop-signal (yields SSRT)
  • Cognitive flexibility / set shifting -> Task switching
  • Working memory updating under continuous load -> N-back

Step 3: Configure Parameters

For each selected paradigm, consult references/classic-paradigms.md for the full parameter reference. Apply these general rules:

Timing Parameters
ParameterDefaultAdjustment Rule
Stimulus durationUntil response (RT tasks) or 100-500 ms (brief presentation)Shorten for masking or iconic memory studies; lengthen for patient populations
ISI / ITI1000-2000 msIncrease to 2000-3000 ms for EEG (to separate ERPs); increase for fMRI (jittered 2-8 s for HRF deconvolution)
SOAParadigm-specific (see reference)Short SOA (<300 ms): automatic processes; Long SOA (>500 ms): strategic/controlled processes (Neely, 1977)
Response deadline1500-2000 ms for RT tasksTighten for speed-emphasis; loosen for accuracy-emphasis or elderly/clinical samples
Trial Counts
ScenarioMinimum Trials per ConditionRationale
Large effect (d > 0.8)40-60Stroop, Flanker, AB (Hedge et al., 2018)
Medium effect (d ~ 0.5)60-100Priming, switching, search slopes (McNamara, 2005; Monsell, 2003)
Small effect (d ~ 0.3)100-200Subtle manipulations, individual differences (Baker et al., 2021)
SDT measures (d', c)100+ total (50+ signal, 50+ noise)Macmillan & Creelman (2005)
Reliability-critical (SSRT, K)160-200 totalVerbruggen et al. (2019); Rouder et al. (2011)
Proportion Manipulations
  • Congruency proportion (Stroop, Flanker): 50/50 is the unbiased standard. Deviating introduces list-wide proportion congruency effects that modulate conflict (Logan & Zbrodoff, 1979; Bugg & Crump, 2012). Only deviate if proportion effects are the research question.
  • Cue validity (Posner): 80% valid for endogenous orienting (Posner, 1980); 50% (uninformative) for pure exogenous effects.
  • Stop-signal proportion: 25% is standard. Higher rates induce proactive slowing (Verbruggen et al., 2019).
  • Target prevalence (search, detection): 50% unless studying prevalence effects (Wolfe et al., 2005).
  • Relatedness proportion (priming): Keep at ~25-50% to minimize strategic expectancy; lower RP isolates automatic priming (Neely et al., 1989).

Step 4: Design Controls

Apply these control procedures:

4.1 Condition Assignment
  • Within-subjects preferred for most cognitive paradigms (maximizes power by eliminating between-subject variance; Maxwell & Delaney, 2004)
  • Between-subjects required when conditions produce carry-over (e.g., training studies, deception manipulations, proportion manipulations)
  • See references/design-principles.md, Section 1 for the full decision framework
4.2 Counterbalancing
  • 2-3 conditions: Full counterbalancing (all k! orders)
  • 4+ conditions: Balanced Latin Square (Williams, 1949); ensures each condition precedes every other condition equally often
  • Always counterbalance: Stimulus-response mappings, response hand assignments
  • Pseudo-randomize within blocks: No more than 3-4 consecutive same-condition trials; equal condition transitions (see references/design-principles.md, Section 5.4)
4.3 Practice Trials
  • Simple RT tasks: 10-20 practice trials (Luce, 1986)
  • Complex tasks (task switching, N-back): 20-40 practice trials with feedback
  • Adaptive tasks (staircase): 50-100 familiarization trials before data collection (Watson & Pelli, 1983)
  • Require >80% accuracy in practice before advancing
  • Use different stimuli from experimental trials
4.4 Catch Trials and Comprehension Checks
  • Detection tasks: Include 10-20% no-target catch trials (Posner, 1980)
  • Reading tasks: Comprehension probes after 30-50% of sentences (Just et al., 1982)
  • Masked priming: Post-experiment visibility check or 5-10% awareness probes (Forster & Davis, 1984)

Step 5: Specify Dependent Variables and Analysis

Primary DVs by Paradigm Type
Paradigm TypePrimary DVAnalysis Notes
Speeded RT tasksRT (ms) + accuracy (%)Always report both. Apply RT trimming: remove anticipatory (<200 ms) and slow (>2.5 SD or >2000 ms) responses. Analyze only correct trials for RT.
Accuracy-focused tasksProportion correct or d'Use SDT when signal/noise distinction applies (Macmillan & Creelman, 2005)
Memory tasksHit rate, false alarm rate, d', KCowan's K for change detection; d' for recognition
Adaptive thresholdThreshold estimateAverage last 6-8 reversals (staircase); maximum-likelihood estimate (QUEST)
Learning/decision tasksBlock-by-block performanceIGT: (C+D)-(A+B) per block of 20; Delay discounting: indifference points per delay
Recommended Statistical Approaches
  • Repeated-measures ANOVA: Standard for factorial designs; check sphericity (Girden, 1992)
  • Linear mixed-effects models: Preferred for unbalanced designs, missing data, item-level analysis; include random intercepts for subjects and items ("by-subject and by-item" approach; Baayen et al., 2008)
  • Bayesian analysis: Report Bayes factors for key comparisons when sample size is limited or null effects are informative (Rouder et al., 2009)
  • Drift-diffusion modeling: For decomposing RT and accuracy into drift rate, boundary separation, and non-decision time (Ratcliff & McKoon, 2008)

Quick Reference: Paradigm Selection Matrix

Research Question TypeFirst-Choice ParadigmAlternative
Does X capture attention?Posner cueing / Visual searchDot-probe task
Does X interfere with processing?Stroop / FlankerSimon task
What is VWM capacity for X?Change detectionContinuous report
Does X cause false memories?DRM paradigmMisinformation paradigm
Is recognition based on recollection or familiarity?Remember-KnowROC analysis
Does X affect inhibitory control?Stop-signal (SSRT)Go/No-Go
Does X modulate cognitive flexibility?Task switchingWisconsin Card Sorting
Is X processed without awareness?Backward masking + primingContinuous flash suppression
What is the perceptual threshold for X?QUEST / Staircase + 2AFCMethod of constant stimuli
Does X affect reading?Self-paced reading / Eye-trackingERP (N400, P600)
Does X prime Y?Semantic priming + LDTCross-modal priming
Is X related to impulsivity?Delay discountingStop-signal
Does X affect decision making under risk?Iowa Gambling TaskBalloon Analogue Risk Task
Does X affect WM updating?N-backOperation span

Domain-Specific Warnings

These are non-obvious pitfalls that require domain expertise:

  1. Stroop: Using fewer than 4 color-response mappings introduces item-specific contingency learning that mimics Stroop effects but is not conflict-based (Schmidt & Besner, 2008). Always use >= 4 colors.

  2. Stop-signal: Never estimate SSRT from mean Go RT alone. The integration method accounts for the Go RT distribution shape. Failed-stop RTs must be faster than Go RTs (independence assumption check; Logan & Cowan, 1984). Use the consensus guide (Verbruggen et al., 2019).

  3. Attentional blink: T1 must be masked (by a trailing distractor). Removing the T1+1 item eliminates the AB entirely (Raymond et al., 1992). Always include T1+1 distractor.

  4. Change detection (VWM): Retention intervals shorter than ~900 ms may allow iconic memory to contribute, inflating K estimates. Use >=900 ms retention interval, and consider articulatory suppression to prevent verbal recoding (Luck & Vogel, 1997; Vogel et al., 2001).

  5. DRM: False recall varies dramatically across lists (10-60%). Always report which word lists were used and their BAS values (Stadler et al., 1999). Roediger et al. (2001) normed 55 lists.

  6. Iowa Gambling Task: Apparent "learning" may reflect frequency-of-loss avoidance rather than long-term value sensitivity. Consider deck-by-deck analysis, not just (C+D)-(A+B) (Steingroever et al., 2013).

  7. Priming: High relatedness proportions (>50%) inflate priming through strategic expectancy, not automatic spreading activation. Use RP <= 25% to isolate automatic priming (Neely et al., 1989).

  8. Task switching: In alternating-runs designs (AABB), the response-stimulus interval (RSI) is confounded with cue-stimulus interval (CSI). Use cued-switching designs to separate preparation time from passive decay (Monsell, 2003; Meiran, 1996).

  9. Psychophysical staircases: Step sizes of <5% lead to staircases that fail to generate enough reversals. Use initial step sizes of at least 10-20% of the expected threshold range, then halve after the first 2-4 reversals (Garcia-Perez, 1998).

  10. N-back: Omission errors are more informative than commission errors (unlike Go/No-Go). Always report d' rather than raw accuracy, as d' separates sensitivity from bias (Haatveit et al., 2010). Include lure trials (n-1 or n+1 matches) to assess interference susceptibility (Gray et al., 2003).


References

  • Baayen, R. H., Davidson, D. J., & Bates, D. M. (2008). Mixed-effects modeling with crossed random effects for subjects and items. Journal of Memory and Language, 59, 390-412.
  • Baker, D. H., Vilidaite, G., Lygo, F. A., et al. (2021). Power contours: Optimising sample size and precision in experimental psychology and human neuroscience. Psychological Methods, 26, 295-314.
  • Brysbaert, M., & Stevens, M. (2018). Power analysis and effect size in mixed effects models. Journal of Cognition, 1(1), 9.
  • Cohen, J. (1988). Statistical Power Analysis for the Behavioral Sciences (2nd ed.). Erlbaum.
  • Hedge, C., Powell, G., & Sumner, P. (2018). The reliability paradox: Why robust cognitive tasks do not produce reliable individual differences. Behavior Research Methods, 50, 1166-1186.
  • Macmillan, N. A., & Creelman, C. D. (2005). Detection Theory: A User's Guide (2nd ed.). Erlbaum.
  • Verbruggen, F., Aron, A. R., Band, G. P., et al. (2019). A consensus guide to capturing the ability to inhibit actions and impulsive behaviors in the stop-signal task. eLife, 8, e46323.

Bundled files

The model reads these on demand while the skill is loaded. They are exposed as readable files and are never executed.

Frequently asked questions

What does the Cognitive Paradigm Design AI skill do?

Expert guidance for selecting and parameterizing cognitive psychology experimental paradigms based on research questions

Why use Cognitive Paradigm Design on TypingMind?

Because you install it once and use it with any model. Cognitive Paradigm Design is plain Markdown rather than provider-specific code, so the same skill runs on GPT-5, Claude, Gemini, Grok, or a local model — and you can switch model mid-chat without it breaking. TypingMind runs on your own API keys, so you pay providers directly instead of a per-seat subscription, and your skills and chats stay in your own storage.

How do I install Cognitive Paradigm Design in TypingMind?

Open Plugins → Skills → Install from GitHub in TypingMind and paste https://github.com/NeuroAIHub/BrainPilot/tree/main/packages/skills/skills/03_Cognitive_Psychology/cognitive-paradigm-design. TypingMind reads its SKILL.md and bundles its files and installs it as a skill you can enable per chat.

Which AI models can use Cognitive Paradigm Design?

Any model you connect in TypingMind. AI skills are plain Markdown instructions rather than provider-specific code, so GPT, Claude, Gemini, Grok, and local models can all load this skill when a request matches it.

How many AI models can I use with Cognitive Paradigm Design?

As many as you like. As long as a model supports skills, you can use Cognitive Paradigm Design with it — GPT, Claude, Gemini, Grok, DeepSeek, Mistral, Llama and more — all on TypingMind with your own API keys.

Is the Cognitive Paradigm Design AI skill free?

Yes. It is published on GitHub by NeuroAIHub under the AGPL-3.0 license. You only pay your own AI provider for the tokens you use.

What are AI skills?

An AI skill is a reusable instruction bundle that teaches an AI model how to do one specific task. It follows the open Agent Skills format: a SKILL.md file with a name and description, plus any scripts, templates or reference files the model may need. The model reads the instructions only when your request matches the skill, so an installed skill costs nothing until it is used.

How are AI skills different from plugins or MCP servers?

A plugin or MCP server gives a model new tools to call — code that runs somewhere and returns a result. An AI skill gives the model knowledge and process instead: how to approach a task, which steps to follow, what good output looks like. Skills are plain Markdown, so they need no server, no API key and no runtime, and they work with any model.

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