ISO 13485 Certification Documentation Assistant
Overview
This skill helps medical device manufacturers prepare comprehensive documentation for ISO 13485:2016 certification. It provides tools, templates, references, and guidance to create, review, and gap-analyze all required Quality Management System (QMS) documentation.
What this skill provides:
- Gap analysis of existing documentation
- Templates for all mandatory documents
- Comprehensive requirements guidance
- Step-by-step documentation creation
- Identification of missing documentation
- Compliance checklists
When to use this skill:
- Starting ISO 13485 certification process
- Conducting gap analysis against ISO 13485
- Creating or updating QMS documentation
- Preparing for certification audit
- Transitioning from FDA QSR to QMSR
- Harmonizing with EU MDR requirements
Core Workflow
1. Assess Current State (Gap Analysis)
When to start here: User has existing documentation and needs to identify gaps
Process:
-
Collect existing documentation:
- Ask user to provide directory of current QMS documents
- Documents can be in any format (.txt, .md, .doc, .docx, .pdf)
- Include any procedures, manuals, work instructions, forms
-
Run gap analysis script:
bashpython scripts/gap_analyzer.py --docs-dir <path_to_docs> --output gap-report.json -
Review results:
- Identify which required procedures are present vs. missing. The script checks the 26 always-applicable documented procedures (it omits the conditional "when applicable" ones — design, installation, servicing, sterilization, etc. — to avoid false-negative gaps); the full set is "31" by convention. See
references/quick-reference.mdfor the full list and counting note. - Identify missing key documents (Quality Manual, MDF, etc.)
- Calculate compliance percentage (reported against the 26 procedures the script tracks)
- Prioritize missing documentation, including any conditional procedures that apply to this manufacturer
- Identify which required procedures are present vs. missing. The script checks the 26 always-applicable documented procedures (it omits the conditional "when applicable" ones — design, installation, servicing, sterilization, etc. — to avoid false-negative gaps); the full set is "31" by convention. See
-
Present findings to user:
- Summarize what exists
- Clearly list what's missing
- Provide prioritized action plan
- Estimate effort required
Output: Comprehensive gap analysis report with prioritized action items
2. Understand Requirements (Reference Consultation)
When to use: User needs to understand specific ISO 13485 requirements
Available references:
references/iso-13485-requirements.md- Complete clause-by-clause breakdownreferences/mandatory-documents.md- All 31 required procedures explainedreferences/gap-analysis-checklist.md- Detailed compliance checklistreferences/quality-manual-guide.md- How to create Quality Manual
How to use:
-
For specific clause questions:
- Read relevant section from
iso-13485-requirements.md - Explain requirements in plain language
- Provide practical examples
- Read relevant section from
-
For document requirements:
- Consult
mandatory-documents.md - Explain what must be documented
- Clarify when documents are applicable vs. excludable
- Consult
-
For implementation guidance:
- Use
quality-manual-guide.mdfor policy-level documents - Provide step-by-step creation process
- Show examples of good vs. poor implementation
- Use
Key reference sections to know:
- Clause 4: QMS requirements, documentation, risk management, software validation
- Clause 5: Management responsibility, quality policy, objectives, management review
- Clause 6: Resources, competence, training, infrastructure
- Clause 7: Product realization, design, purchasing, production, traceability
- Clause 8: Measurement, audits, CAPA, complaints, data analysis
3. Create Documentation (Template-Based Generation)
When to use: User needs to create specific QMS documents.
Available templates:
- Quality Manual:
assets/templates/quality-manual-template.md - CAPA Procedure:
assets/templates/procedures/CAPA-procedure-template.md - Document Control:
assets/templates/procedures/document-control-procedure-template.md
Follow the full creation process, priority order (Phases 1-6), and per-document deep dives (Quality Manual, SOPs, CAPA, Medical Device Files) in references/document-creation-guide.md. That guide also covers the detailed clause-by-clause comprehensive gap analysis.
Routing Guidance
- Gap analysis (existing docs) → Core Workflow Step 1; run
scripts/gap_analyzer.py. Detailed clause-by-clause assessment:references/document-creation-guide.md. - Understanding a clause/requirement → Core Workflow Step 2; read
references/iso-13485-requirements.mdandreferences/mandatory-documents.md. - Creating a Quality Manual / SOP / CAPA / MDF →
references/document-creation-guide.md+ the matching template inassets/templates/. - Matching a user situation to an approach (startup from scratch, existing-QMS gap, single document, QMSR transition, audit prep) →
references/common-scenarios.md. - Writing-quality, exclusions, mistakes to avoid →
references/best-practices.md. - The 31 procedures, regulatory requirements by region, retention periods →
references/quick-reference.md.
References Index
references/iso-13485-requirements.md— complete ISO 13485:2016 breakdown, clause by clause.references/mandatory-documents.md— all 31 required procedures plus other mandatory documents, explained.references/gap-analysis-checklist.md— comprehensive compliance checklist.references/quality-manual-guide.md— step-by-step guide for a compliant Quality Manual.references/document-creation-guide.md— full document-creation process, priority order, and per-document deep dives (QM, SOPs, CAPA, MDF, detailed gap analysis).references/common-scenarios.md— worked approaches for the five most common user situations.references/best-practices.md— document-development best practices, exclusion rules and examples, common mistakes.references/quick-reference.md— the 31 procedures, regulatory requirements by region, document retention periods.
scripts/
gap_analyzer.py— automated tool to analyze existing documentation and identify gaps against ISO 13485 requirements.
assets/templates/
quality-manual-template.md,procedures/CAPA-procedure-template.md,procedures/document-control-procedure-template.md.
Getting Started
First-time users should:
- Read
references/iso-13485-requirements.mdto understand the standard. - If you have existing documentation, run the gap analysis script (Core Workflow Step 1).
- Create the Quality Manual using the template and
references/document-creation-guide.md. - Develop procedures in priority order (see the guide).
- Use
references/gap-analysis-checklist.mdfor final validation.
Need help? Start by describing your situation: what stage you're at, what you have, and what you need to create — then route via the guidance above.


